Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Mir497b-201ENSMUST00000093601 125 ntBASIC14.92□□□□□ -0.02
Tpm1P58771 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.92□□□□□ -0.02
Tpm1P58771 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Tpm1P58771 Syt7-205ENSMUST00000224135 1557 ntBASIC14.92□□□□□ -0.02
Tpm1P58771 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Tpm1P58771 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.92□□□□□ -0.02
Tpm1P58771 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Tpm1P58771 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.91□□□□□ -0.02
Tpm1P58771 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Mir874-201ENSMUST00000104769 76 ntBASIC14.91□□□□□ -0.02
Tpm1P58771 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Tpm1P58771 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Tpm1P58771 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.91□□□□□ -0.02
Tpm1P58771 Gm5566-201ENSMUST00000116118 459 ntBASIC14.91□□□□□ -0.02
Tpm1P58771 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Tpm1P58771 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.91□□□□□ -0.02
Tpm1P58771 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.91□□□□□ -0.02
Tpm1P58771 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Tpm1P58771 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Tpm1P58771 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Tpm1P58771 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tpm1P58771 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.9□□□□□ -0.02
Tpm1P58771 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Tpm1P58771 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Tpm1P58771 Gm13015-201ENSMUST00000118674 204 ntBASIC14.9□□□□□ -0.02
Tpm1P58771 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Tpm1P58771 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.9□□□□□ -0.02
Tpm1P58771 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Tpm1P58771 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Tpm1P58771 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.9□□□□□ -0.02
Tpm1P58771 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.9□□□□□ -0.02
Tpm1P58771 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.9□□□□□ -0.02
Tpm1P58771 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Tpm1P58771 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Tpm1P58771 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tpm1P58771 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms