Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.16□□□□□ -0.3
CtskP55097 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Gm13392-201ENSMUST00000117708 150 ntBASIC13.16□□□□□ -0.3
CtskP55097 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.16□□□□□ -0.3
CtskP55097 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.16□□□□□ -0.3
CtskP55097 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.16□□□□□ -0.3
CtskP55097 Gm37424-201ENSMUST00000191727 561 ntBASIC13.16□□□□□ -0.3
CtskP55097 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.16□□□□□ -0.3
CtskP55097 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.16□□□□□ -0.3
CtskP55097 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CtskP55097 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CtskP55097 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CtskP55097 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CtskP55097 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.16□□□□□ -0.3
CtskP55097 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CtskP55097 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.15□□□□□ -0.3
CtskP55097 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CtskP55097 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.15□□□□□ -0.3
CtskP55097 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
CtskP55097 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CtskP55097 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
CtskP55097 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
CtskP55097 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.15□□□□□ -0.3
CtskP55097 Gm8062-201ENSMUST00000139696 444 ntBASIC13.15□□□□□ -0.3
CtskP55097 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.15□□□□□ -0.3
CtskP55097 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CtskP55097 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CtskP55097 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.15□□□□□ -0.3
CtskP55097 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.15□□□□□ -0.3
CtskP55097 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.15□□□□□ -0.3
CtskP55097 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.15□□□□□ -0.3
CtskP55097 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CtskP55097 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CtskP55097 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.15□□□□□ -0.3
CtskP55097 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CtskP55097 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.15□□□□□ -0.3
CtskP55097 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CtskP55097 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CtskP55097 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.14□□□□□ -0.31
CtskP55097 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CtskP55097 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
CtskP55097 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CtskP55097 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CtskP55097 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CtskP55097 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CtskP55097 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CtskP55097 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CtskP55097 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CtskP55097 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CtskP55097 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CtskP55097 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.14□□□□□ -0.31
CtskP55097 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CtskP55097 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms