Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Msh6P54276 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.83■□□□□ 0.28
Msh6P54276 Gm5781-201ENSMUST00000219792 443 ntBASIC16.83■□□□□ 0.28
Msh6P54276 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.83■□□□□ 0.28
Msh6P54276 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.83■□□□□ 0.28
Msh6P54276 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Msh6P54276 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Msh6P54276 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Msh6P54276 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Msh6P54276 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msh6P54276 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Msh6P54276 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Gm2606-201ENSMUST00000100754 1002 ntBASIC16.82■□□□□ 0.28
Msh6P54276 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Msh6P54276 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.82■□□□□ 0.28
Msh6P54276 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.82■□□□□ 0.28
Msh6P54276 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Gm7293-201ENSMUST00000216682 1007 ntBASIC16.82■□□□□ 0.28
Msh6P54276 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.82■□□□□ 0.28
Msh6P54276 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh6P54276 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Msh6P54276 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Msh6P54276 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Msh6P54276 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.81■□□□□ 0.28
Msh6P54276 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.81■□□□□ 0.28
Msh6P54276 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.81■□□□□ 0.28
Msh6P54276 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 CT025533.2-201ENSMUST00000228715 1248 ntBASIC16.81■□□□□ 0.28
Msh6P54276 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.81■□□□□ 0.28
Msh6P54276 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.81■□□□□ 0.28
Msh6P54276 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Msh6P54276 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Msh6P54276 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh6P54276 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh6P54276 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Msh6P54276 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.8■□□□□ 0.28
Msh6P54276 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.8■□□□□ 0.28
Msh6P54276 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.8■□□□□ 0.28
Msh6P54276 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Msh6P54276 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Msh6P54276 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.8■□□□□ 0.28
Msh6P54276 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.8■□□□□ 0.28
Msh6P54276 Mir7221-201ENSMUST00000184009 72 ntBASIC16.8■□□□□ 0.28
Msh6P54276 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC16.8■□□□□ 0.28
Msh6P54276 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Msh6P54276 Gm19163-201ENSMUST00000223313 780 ntBASIC16.8■□□□□ 0.28
Msh6P54276 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh6P54276 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Msh6P54276 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh6P54276 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh6P54276 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh6P54276 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh6P54276 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh6P54276 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh6P54276 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.8■□□□□ 0.28
Msh6P54276 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh6P54276 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh6P54276 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh6P54276 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Msh6P54276 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh6P54276 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms