Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Fdft1P53798 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Fdft1P53798 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Fdft1P53798 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.39□□□□□ -0.27
Fdft1P53798 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.39□□□□□ -0.27
Fdft1P53798 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.39□□□□□ -0.27
Fdft1P53798 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.39□□□□□ -0.27
Fdft1P53798 Gm20445-201ENSMUST00000061905 565 ntBASIC13.39□□□□□ -0.27
Fdft1P53798 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Fdft1P53798 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Fdft1P53798 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.39□□□□□ -0.27
Fdft1P53798 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fdft1P53798 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Fdft1P53798 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Gm27838-201ENSMUST00000184829 128 ntBASIC13.38□□□□□ -0.27
Fdft1P53798 Mir7023-201ENSMUST00000185093 64 ntBASIC13.38□□□□□ -0.27
Fdft1P53798 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Fdft1P53798 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.38□□□□□ -0.27
Fdft1P53798 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Fdft1P53798 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.38□□□□□ -0.27
Fdft1P53798 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.38□□□□□ -0.27
Fdft1P53798 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.38□□□□□ -0.27
Fdft1P53798 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fdft1P53798 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Fdft1P53798 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Fdft1P53798 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.37□□□□□ -0.27
Fdft1P53798 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Fdft1P53798 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Fdft1P53798 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 Gm15770-201ENSMUST00000117498 584 ntBASIC13.37□□□□□ -0.27
Fdft1P53798 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Fdft1P53798 Gm29667-201ENSMUST00000190817 490 ntBASIC13.37□□□□□ -0.27
Fdft1P53798 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.37□□□□□ -0.27
Fdft1P53798 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fdft1P53798 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Fdft1P53798 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Fdft1P53798 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Fdft1P53798 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.36□□□□□ -0.27
Fdft1P53798 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.36□□□□□ -0.27
Fdft1P53798 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fdft1P53798 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.36□□□□□ -0.27
Fdft1P53798 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms