Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx3P50481 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.54□□□□□ -0.24
Lhx3P50481 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx3P50481 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx3P50481 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx3P50481 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx3P50481 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx3P50481 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.54□□□□□ -0.24
Lhx3P50481 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx3P50481 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lhx3P50481 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.53□□□□□ -0.24
Lhx3P50481 Gm13123-201ENSMUST00000122173 492 ntBASIC13.53□□□□□ -0.24
Lhx3P50481 Gm11978-201ENSMUST00000122315 466 ntBASIC13.53□□□□□ -0.24
Lhx3P50481 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Lhx3P50481 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lhx3P50481 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Lhx3P50481 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.53□□□□□ -0.24
Lhx3P50481 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.53□□□□□ -0.24
Lhx3P50481 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.53□□□□□ -0.24
Lhx3P50481 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.53□□□□□ -0.24
Lhx3P50481 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.53□□□□□ -0.24
Lhx3P50481 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Lhx3P50481 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lhx3P50481 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Lhx3P50481 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx3P50481 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx3P50481 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.52□□□□□ -0.24
Lhx3P50481 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx3P50481 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx3P50481 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx3P50481 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Lhx3P50481 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx3P50481 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.52□□□□□ -0.24
Lhx3P50481 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx3P50481 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Lhx3P50481 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx3P50481 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx3P50481 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lhx3P50481 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Lhx3P50481 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lhx3P50481 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.52□□□□□ -0.25
Lhx3P50481 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lhx3P50481 Gm37922-201ENSMUST00000195596 455 ntBASIC13.52□□□□□ -0.25
Lhx3P50481 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.52□□□□□ -0.25
Lhx3P50481 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.52□□□□□ -0.25
Lhx3P50481 Gm29705-201ENSMUST00000212598 474 ntBASIC13.52□□□□□ -0.25
Lhx3P50481 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lhx3P50481 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Lhx3P50481 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Lhx3P50481 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lhx3P50481 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms