Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
GdnfP48540 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.75□□□□□ -0.53
GdnfP48540 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
GdnfP48540 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.74□□□□□ -0.53
GdnfP48540 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.74□□□□□ -0.53
GdnfP48540 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
GdnfP48540 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
GdnfP48540 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.74□□□□□ -0.53
GdnfP48540 Gm15957-201ENSMUST00000118893 974 ntBASIC11.74□□□□□ -0.53
GdnfP48540 Mir1897-201ENSMUST00000122581 272 ntBASIC11.74□□□□□ -0.53
GdnfP48540 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Gm27533-201ENSMUST00000183800 152 ntBASIC11.74□□□□□ -0.53
GdnfP48540 AA619741-201ENSMUST00000195095 646 ntBASIC11.74□□□□□ -0.53
GdnfP48540 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.74□□□□□ -0.53
GdnfP48540 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.74□□□□□ -0.53
GdnfP48540 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.74□□□□□ -0.53
GdnfP48540 Shd-206ENSMUST00000225145 998 ntBASIC11.74□□□□□ -0.53
GdnfP48540 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
GdnfP48540 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.74□□□□□ -0.53
GdnfP48540 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
GdnfP48540 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Gm37744-201ENSMUST00000194616 1590 ntBASIC11.74□□□□□ -0.53
GdnfP48540 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
GdnfP48540 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
GdnfP48540 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Gm13223-201ENSMUST00000118609 747 ntBASIC11.73□□□□□ -0.53
GdnfP48540 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.73□□□□□ -0.53
GdnfP48540 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
GdnfP48540 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.73□□□□□ -0.53
GdnfP48540 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
GdnfP48540 Gm27430-201ENSMUST00000184585 107 ntBASIC11.73□□□□□ -0.53
GdnfP48540 Gm44333-201ENSMUST00000197168 107 ntBASIC11.73□□□□□ -0.53
GdnfP48540 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.73□□□□□ -0.53
GdnfP48540 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
GdnfP48540 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.73□□□□□ -0.53
GdnfP48540 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
GdnfP48540 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.73□□□□□ -0.53
GdnfP48540 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
GdnfP48540 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
GdnfP48540 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.73□□□□□ -0.53
GdnfP48540 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms