Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Prox1P48437 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Prox1P48437 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.85□□□□□ -0.35
Prox1P48437 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Prox1P48437 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.85□□□□□ -0.35
Prox1P48437 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.85□□□□□ -0.35
Prox1P48437 Gm37714-201ENSMUST00000194742 342 ntBASIC12.85□□□□□ -0.35
Prox1P48437 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.85□□□□□ -0.35
Prox1P48437 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.85□□□□□ -0.35
Prox1P48437 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Prox1P48437 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.85□□□□□ -0.35
Prox1P48437 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Prox1P48437 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Prox1P48437 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Prox1P48437 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.84□□□□□ -0.35
Prox1P48437 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.84□□□□□ -0.35
Prox1P48437 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.84□□□□□ -0.35
Prox1P48437 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Gm14701-201ENSMUST00000117156 348 ntBASIC12.84□□□□□ -0.35
Prox1P48437 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.84□□□□□ -0.35
Prox1P48437 Gm44872-201ENSMUST00000207864 420 ntBASIC12.84□□□□□ -0.35
Prox1P48437 Gm8396-201ENSMUST00000057361 823 ntBASIC12.84□□□□□ -0.35
Prox1P48437 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Prox1P48437 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Prox1P48437 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.84□□□□□ -0.35
Prox1P48437 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.84□□□□□ -0.35
Prox1P48437 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.84□□□□□ -0.35
Prox1P48437 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.84□□□□□ -0.35
Prox1P48437 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prox1P48437 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Prox1P48437 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Prox1P48437 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Prox1P48437 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Prox1P48437 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Prox1P48437 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.83□□□□□ -0.36
Prox1P48437 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Prox1P48437 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.83□□□□□ -0.36
Prox1P48437 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Prox1P48437 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Gm13015-201ENSMUST00000118674 204 ntBASIC12.83□□□□□ -0.36
Prox1P48437 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Prox1P48437 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.83□□□□□ -0.36
Prox1P48437 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.83□□□□□ -0.36
Prox1P48437 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.83□□□□□ -0.36
Prox1P48437 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.83□□□□□ -0.36
Prox1P48437 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prox1P48437 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms