Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.53□□□□□ -0.4
Sox2P48432 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sox2P48432 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sox2P48432 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox2P48432 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox2P48432 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Sox2P48432 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sox2P48432 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.52□□□□□ -0.41
Sox2P48432 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Gm24543-201ENSMUST00000103867 82 ntBASIC12.52□□□□□ -0.41
Sox2P48432 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.52□□□□□ -0.41
Sox2P48432 Gm25911-201ENSMUST00000157621 56 ntBASIC12.52□□□□□ -0.41
Sox2P48432 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Sox2P48432 Mir6990-201ENSMUST00000183724 91 ntBASIC12.52□□□□□ -0.41
Sox2P48432 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.52□□□□□ -0.41
Sox2P48432 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sox2P48432 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sox2P48432 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sox2P48432 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sox2P48432 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sox2P48432 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.52□□□□□ -0.41
Sox2P48432 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox2P48432 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox2P48432 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.51□□□□□ -0.41
Sox2P48432 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Sox2P48432 Mir1897-201ENSMUST00000122581 272 ntBASIC12.51□□□□□ -0.41
Sox2P48432 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.51□□□□□ -0.41
Sox2P48432 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox2P48432 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox2P48432 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Sox2P48432 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Sox2P48432 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox2P48432 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms