Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx2P48379 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.03□□□□□ -0.16
Rfx2P48379 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx2P48379 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfx2P48379 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx2P48379 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfx2P48379 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rfx2P48379 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx2P48379 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.03□□□□□ -0.16
Rfx2P48379 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx2P48379 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx2P48379 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx2P48379 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx2P48379 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfx2P48379 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx2P48379 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx2P48379 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.02□□□□□ -0.16
Rfx2P48379 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx2P48379 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
Rfx2P48379 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx2P48379 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx2P48379 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx2P48379 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.02□□□□□ -0.16
Rfx2P48379 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx2P48379 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx2P48379 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Rfx2P48379 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx2P48379 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx2P48379 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.02□□□□□ -0.16
Rfx2P48379 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx2P48379 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx2P48379 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx2P48379 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx2P48379 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx2P48379 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx2P48379 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.02□□□□□ -0.17
Rfx2P48379 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.02□□□□□ -0.17
Rfx2P48379 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.02□□□□□ -0.17
Rfx2P48379 Gm9899-201ENSMUST00000065519 555 ntBASIC14.02□□□□□ -0.17
Rfx2P48379 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx2P48379 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx2P48379 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx2P48379 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx2P48379 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx2P48379 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx2P48379 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx2P48379 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.02□□□□□ -0.17
Rfx2P48379 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx2P48379 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Rfx2P48379 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rfx2P48379 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.01□□□□□ -0.17
Rfx2P48379 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rfx2P48379 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rfx2P48379 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rfx2P48379 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Mir1938-201ENSMUST00000158746 100 ntBASIC14.01□□□□□ -0.17
Rfx2P48379 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfx2P48379 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Gm45841-201ENSMUST00000207700 164 ntBASIC14.01□□□□□ -0.17
Rfx2P48379 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Rfx2P48379 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rfx2P48379 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rfx2P48379 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rfx2P48379 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx2P48379 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx2P48379 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx2P48379 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx2P48379 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx2P48379 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx2P48379 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx2P48379 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfx2P48379 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx2P48379 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfx2P48379 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfx2P48379 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14□□□□□ -0.17
Rfx2P48379 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14□□□□□ -0.17
Rfx2P48379 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx2P48379 Gm12742-201ENSMUST00000117326 410 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms