Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TgfaP48030 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TgfaP48030 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TgfaP48030 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.59□□□□□ -0.55
TgfaP48030 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
TgfaP48030 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TgfaP48030 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.59□□□□□ -0.55
TgfaP48030 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
TgfaP48030 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
TgfaP48030 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.59□□□□□ -0.55
TgfaP48030 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TgfaP48030 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Gm10434-201ENSMUST00000101158 471 ntBASIC11.59□□□□□ -0.55
TgfaP48030 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
TgfaP48030 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.59□□□□□ -0.55
TgfaP48030 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.59□□□□□ -0.55
TgfaP48030 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.59□□□□□ -0.55
TgfaP48030 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.59□□□□□ -0.55
TgfaP48030 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.59□□□□□ -0.55
TgfaP48030 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TgfaP48030 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.59□□□□□ -0.55
TgfaP48030 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
TgfaP48030 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
TgfaP48030 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.59□□□□□ -0.55
TgfaP48030 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.59□□□□□ -0.55
TgfaP48030 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TgfaP48030 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.59□□□□□ -0.55
TgfaP48030 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
TgfaP48030 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
TgfaP48030 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
TgfaP48030 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
TgfaP48030 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.58□□□□□ -0.56
TgfaP48030 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
TgfaP48030 Gm16505-201ENSMUST00000179981 232 ntBASIC11.58□□□□□ -0.56
TgfaP48030 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
TgfaP48030 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
TgfaP48030 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.58□□□□□ -0.56
TgfaP48030 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TgfaP48030 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.58□□□□□ -0.56
TgfaP48030 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
TgfaP48030 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
TgfaP48030 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TgfaP48030 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TgfaP48030 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TgfaP48030 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TgfaP48030 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
TgfaP48030 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
TgfaP48030 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.57□□□□□ -0.56
TgfaP48030 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TgfaP48030 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TgfaP48030 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.57□□□□□ -0.56
TgfaP48030 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms