Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Timp3P39876 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Timp3P39876 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11□□□□□ -0.65
Timp3P39876 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Timp3P39876 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Timp3P39876 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.99□□□□□ -0.65
Timp3P39876 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.99□□□□□ -0.65
Timp3P39876 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.99□□□□□ -0.65
Timp3P39876 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Timp3P39876 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.99□□□□□ -0.65
Timp3P39876 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.99□□□□□ -0.65
Timp3P39876 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Timp3P39876 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Gm6266-201ENSMUST00000203844 806 ntBASIC10.99□□□□□ -0.65
Timp3P39876 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.99□□□□□ -0.65
Timp3P39876 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.99□□□□□ -0.65
Timp3P39876 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Timp3P39876 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.99□□□□□ -0.65
Timp3P39876 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.99□□□□□ -0.65
Timp3P39876 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Timp3P39876 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Timp3P39876 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.99□□□□□ -0.65
Timp3P39876 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Timp3P39876 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Timp3P39876 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Timp3P39876 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Timp3P39876 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 AC159196.2-201ENSMUST00000224082 1622 ntBASIC10.98□□□□□ -0.65
Timp3P39876 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Timp3P39876 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.98□□□□□ -0.65
Timp3P39876 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.98□□□□□ -0.65
Timp3P39876 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.98□□□□□ -0.65
Timp3P39876 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.98□□□□□ -0.65
Timp3P39876 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Timp3P39876 Gm26464-201ENSMUST00000157094 305 ntBASIC10.98□□□□□ -0.65
Timp3P39876 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Gm6244-201ENSMUST00000178732 841 ntBASIC10.98□□□□□ -0.65
Timp3P39876 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Timp3P39876 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms