Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gm15240-201ENSMUST00000118156 720 ntBASIC12.43□□□□□ -0.42
Hoxc5P32043 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.43□□□□□ -0.42
Hoxc5P32043 Gm27989-201ENSMUST00000184721 107 ntBASIC12.43□□□□□ -0.42
Hoxc5P32043 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.43□□□□□ -0.42
Hoxc5P32043 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.43□□□□□ -0.42
Hoxc5P32043 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hoxc5P32043 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.43□□□□□ -0.42
Hoxc5P32043 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hoxc5P32043 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Hoxc5P32043 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxc5P32043 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.42□□□□□ -0.42
Hoxc5P32043 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hoxc5P32043 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Gm12151-201ENSMUST00000121374 290 ntBASIC12.42□□□□□ -0.42
Hoxc5P32043 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Hoxc5P32043 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.42□□□□□ -0.42
Hoxc5P32043 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Hoxc5P32043 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxc5P32043 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hoxc5P32043 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Hoxc5P32043 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxc5P32043 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.42□□□□□ -0.42
Hoxc5P32043 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hoxc5P32043 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxc5P32043 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc5P32043 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxc5P32043 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc5P32043 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc5P32043 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc5P32043 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc5P32043 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc5P32043 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc5P32043 Gm15770-201ENSMUST00000117498 584 ntBASIC12.41□□□□□ -0.42
Hoxc5P32043 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Hoxc5P32043 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc5P32043 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc5P32043 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc5P32043 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc5P32043 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Hoxc5P32043 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc5P32043 Gm9522-201ENSMUST00000182394 926 ntBASIC12.41□□□□□ -0.42
Hoxc5P32043 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc5P32043 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc5P32043 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.41□□□□□ -0.42
Hoxc5P32043 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc5P32043 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxc5P32043 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc5P32043 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.41□□□□□ -0.42
Hoxc5P32043 Gm17795-201ENSMUST00000214505 757 ntBASIC12.41□□□□□ -0.42
Hoxc5P32043 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxc5P32043 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.41□□□□□ -0.42
Hoxc5P32043 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms