Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc11P31313 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc11P31313 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hoxc11P31313 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.98□□□□□ -0.33
Hoxc11P31313 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Hoxc11P31313 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc11P31313 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc11P31313 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc11P31313 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hoxc11P31313 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxc11P31313 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxc11P31313 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc11P31313 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc11P31313 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.97□□□□□ -0.33
Hoxc11P31313 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc11P31313 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxc11P31313 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.97□□□□□ -0.33
Hoxc11P31313 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Hoxc11P31313 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Gm13226-201ENSMUST00000117838 404 ntBASIC12.97□□□□□ -0.33
Hoxc11P31313 Gm24196-201ENSMUST00000179161 110 ntBASIC12.97□□□□□ -0.33
Hoxc11P31313 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxc11P31313 Gm27847-201ENSMUST00000183711 107 ntBASIC12.97□□□□□ -0.33
Hoxc11P31313 Gm27375-201ENSMUST00000183799 107 ntBASIC12.97□□□□□ -0.33
Hoxc11P31313 Gm38671-201ENSMUST00000200573 130 ntBASIC12.97□□□□□ -0.33
Hoxc11P31313 Gm7561-201ENSMUST00000211203 886 ntBASIC12.97□□□□□ -0.33
Hoxc11P31313 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.97□□□□□ -0.33
Hoxc11P31313 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxc11P31313 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxc11P31313 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hoxc11P31313 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxc11P31313 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxc11P31313 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxc11P31313 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
Hoxc11P31313 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc11P31313 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.96□□□□□ -0.33
Hoxc11P31313 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc11P31313 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Hoxc11P31313 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Hoxc11P31313 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.96□□□□□ -0.33
Hoxc11P31313 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc11P31313 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.96□□□□□ -0.33
Hoxc11P31313 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.96□□□□□ -0.33
Hoxc11P31313 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.96□□□□□ -0.33
Hoxc11P31313 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.96□□□□□ -0.33
Hoxc11P31313 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Gm2445-201ENSMUST00000182798 989 ntBASIC12.96□□□□□ -0.33
Hoxc11P31313 Gm45784-201ENSMUST00000188360 142 ntBASIC12.96□□□□□ -0.33
Hoxc11P31313 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Gm18041-201ENSMUST00000218210 618 ntBASIC12.96□□□□□ -0.33
Hoxc11P31313 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.96□□□□□ -0.33
Hoxc11P31313 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc11P31313 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms