Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Gm11478-201ENSMUST00000117851 599 ntBASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Gm5745-201ENSMUST00000183748 313 ntBASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf1bP25119 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Gm8463-201ENSMUST00000208573 613 ntBASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Matn2-206ENSMUST00000228570 2798 ntBASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf1bP25119 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Gm15806-201ENSMUST00000120696 955 ntBASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Gm5356-201ENSMUST00000093326 615 ntBASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms