Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Syt7-205ENSMUST00000224135 1557 ntBASIC12.63□□□□□ -0.39
TP20293 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.63□□□□□ -0.39
TP20293 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
TP20293 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TP20293 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TP20293 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TP20293 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TP20293 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
TP20293 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TP20293 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.62□□□□□ -0.39
TP20293 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TP20293 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.62□□□□□ -0.39
TP20293 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TP20293 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Gm5866-201ENSMUST00000177881 973 ntBASIC12.62□□□□□ -0.39
TP20293 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TP20293 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.62□□□□□ -0.39
TP20293 Gm2423-201ENSMUST00000074863 733 ntBASIC12.62□□□□□ -0.39
TP20293 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.62□□□□□ -0.39
TP20293 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
TP20293 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.62□□□□□ -0.39
TP20293 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TP20293 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TP20293 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TP20293 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.61□□□□□ -0.39
TP20293 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.61□□□□□ -0.39
TP20293 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.61□□□□□ -0.39
TP20293 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.61□□□□□ -0.39
TP20293 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TP20293 Gm5354-201ENSMUST00000182417 973 ntBASIC12.61□□□□□ -0.39
TP20293 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.61□□□□□ -0.39
TP20293 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.61□□□□□ -0.39
TP20293 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TP20293 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TP20293 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TP20293 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.61□□□□□ -0.39
TP20293 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TP20293 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TP20293 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TP20293 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.61□□□□□ -0.39
TP20293 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
TP20293 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
TP20293 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TP20293 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TP20293 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TP20293 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TP20293 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms