Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.75□□□□□ -0.37
Lire1P11260 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.75□□□□□ -0.37
Lire1P11260 Gm12859-201ENSMUST00000117834 427 ntBASIC12.75□□□□□ -0.37
Lire1P11260 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.75□□□□□ -0.37
Lire1P11260 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.75□□□□□ -0.37
Lire1P11260 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.75□□□□□ -0.37
Lire1P11260 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Gm3436-201ENSMUST00000179930 840 ntBASIC12.75□□□□□ -0.37
Lire1P11260 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Gm45098-201ENSMUST00000207179 657 ntBASIC12.75□□□□□ -0.37
Lire1P11260 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.75□□□□□ -0.37
Lire1P11260 Shd-206ENSMUST00000225145 998 ntBASIC12.75□□□□□ -0.37
Lire1P11260 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lire1P11260 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lire1P11260 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Lire1P11260 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lire1P11260 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.74□□□□□ -0.37
Lire1P11260 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.74□□□□□ -0.37
Lire1P11260 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.74□□□□□ -0.37
Lire1P11260 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lire1P11260 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.74□□□□□ -0.37
Lire1P11260 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Lire1P11260 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.74□□□□□ -0.37
Lire1P11260 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.74□□□□□ -0.37
Lire1P11260 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Gm5035-201ENSMUST00000215581 927 ntBASIC12.74□□□□□ -0.37
Lire1P11260 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.74□□□□□ -0.37
Lire1P11260 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lire1P11260 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lire1P11260 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lire1P11260 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.74□□□□□ -0.37
Lire1P11260 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lire1P11260 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lire1P11260 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.73□□□□□ -0.37
Lire1P11260 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.73□□□□□ -0.37
Lire1P11260 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.73□□□□□ -0.37
Lire1P11260 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lire1P11260 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.73□□□□□ -0.37
Lire1P11260 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.73□□□□□ -0.37
Lire1P11260 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.73□□□□□ -0.37
Lire1P11260 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.73□□□□□ -0.37
Lire1P11260 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.73□□□□□ -0.37
Lire1P11260 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lire1P11260 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Lire1P11260 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Lire1P11260 Gm8515-201ENSMUST00000194852 576 ntBASIC12.73□□□□□ -0.37
Lire1P11260 Olfr286-202ENSMUST00000205305 969 ntBASIC12.73□□□□□ -0.37
Lire1P11260 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms