Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
PtcraP0C6B2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
PtcraP0C6B2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.65□□□□□ -0.55
PtcraP0C6B2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.64□□□□□ -0.55
PtcraP0C6B2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Gm13689-201ENSMUST00000119360 685 ntBASIC11.64□□□□□ -0.55
PtcraP0C6B2 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.64□□□□□ -0.55
PtcraP0C6B2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Gm27701-201ENSMUST00000184498 110 ntBASIC11.64□□□□□ -0.55
PtcraP0C6B2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Gm29608-201ENSMUST00000190444 463 ntBASIC11.64□□□□□ -0.55
PtcraP0C6B2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
PtcraP0C6B2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Gm15429-201ENSMUST00000151268 798 ntBASIC11.63□□□□□ -0.55
PtcraP0C6B2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.63□□□□□ -0.55
PtcraP0C6B2 Gm8515-201ENSMUST00000194852 576 ntBASIC11.63□□□□□ -0.55
PtcraP0C6B2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.63□□□□□ -0.55
PtcraP0C6B2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
PtcraP0C6B2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms