Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
P06323 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Gm12585-201ENSMUST00000117307 290 ntBASIC10.85□□□□□ -0.67
P06323 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.85□□□□□ -0.67
P06323 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.85□□□□□ -0.67
P06323 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.85□□□□□ -0.67
P06323 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.85□□□□□ -0.67
P06323 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.85□□□□□ -0.67
P06323 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.85□□□□□ -0.67
P06323 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.85□□□□□ -0.67
P06323 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
P06323 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.85□□□□□ -0.67
P06323 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
P06323 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC10.85□□□□□ -0.67
P06323 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
P06323 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.85□□□□□ -0.67
P06323 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.85□□□□□ -0.67
P06323 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P06323 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
P06323 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.84□□□□□ -0.67
P06323 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
P06323 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.84□□□□□ -0.67
P06323 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.84□□□□□ -0.67
P06323 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Gm14701-201ENSMUST00000117156 348 ntBASIC10.84□□□□□ -0.67
P06323 Gm25948-201ENSMUST00000175334 112 ntBASIC10.84□□□□□ -0.67
P06323 Gm24420-201ENSMUST00000176676 59 ntBASIC10.84□□□□□ -0.67
P06323 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P06323 Gm3436-201ENSMUST00000179930 840 ntBASIC10.84□□□□□ -0.67
P06323 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.84□□□□□ -0.67
P06323 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
P06323 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
P06323 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P06323 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.84□□□□□ -0.67
P06323 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.84□□□□□ -0.67
P06323 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.84□□□□□ -0.67
P06323 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.84□□□□□ -0.67
P06323 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
P06323 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
P06323 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
P06323 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P06323 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P06323 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.84□□□□□ -0.67
P06323 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
P06323 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P06323 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms