Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P04224 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04224 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.73□□□□□ -0.53
P04224 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
P04224 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.73□□□□□ -0.53
P04224 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P04224 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Gm15427-201ENSMUST00000117288 531 ntBASIC11.73□□□□□ -0.53
P04224 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.73□□□□□ -0.53
P04224 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.73□□□□□ -0.53
P04224 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
P04224 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.73□□□□□ -0.53
P04224 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
P04224 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.73□□□□□ -0.53
P04224 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.73□□□□□ -0.53
P04224 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.73□□□□□ -0.53
P04224 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
P04224 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
P04224 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P04224 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P04224 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04224 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.72□□□□□ -0.53
P04224 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.72□□□□□ -0.53
P04224 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P04224 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
P04224 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P04224 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.72□□□□□ -0.53
P04224 Gm9727-201ENSMUST00000161387 555 ntBASIC11.72□□□□□ -0.53
P04224 Gm17271-201ENSMUST00000165535 355 ntBASIC11.72□□□□□ -0.53
P04224 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
P04224 Gm2445-201ENSMUST00000182798 989 ntBASIC11.72□□□□□ -0.53
P04224 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.72□□□□□ -0.53
P04224 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P04224 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P04224 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
P04224 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P04224 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04224 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
P04224 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
P04224 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.71□□□□□ -0.53
P04224 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P04224 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.71□□□□□ -0.53
P04224 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms