Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.9□□□□□ -0.66
P04212 Gm6888-201ENSMUST00000221983 706 ntBASIC10.9□□□□□ -0.66
P04212 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.9□□□□□ -0.66
P04212 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04212 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04212 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04212 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04212 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.9□□□□□ -0.66
P04212 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04212 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
P04212 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.9□□□□□ -0.66
P04212 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04212 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04212 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04212 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04212 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P04212 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04212 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.9□□□□□ -0.66
P04212 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
P04212 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P04212 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04212 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
P04212 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P04212 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P04212 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
P04212 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
P04212 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P04212 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
P04212 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.9□□□□□ -0.67
P04212 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P04212 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P04212 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.89□□□□□ -0.67
P04212 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
P04212 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Gm6912-201ENSMUST00000117218 544 ntBASIC10.89□□□□□ -0.67
P04212 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
P04212 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Gm38294-201ENSMUST00000192831 381 ntBASIC10.89□□□□□ -0.67
P04212 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.89□□□□□ -0.67
P04212 Gm43703-201ENSMUST00000200523 763 ntBASIC10.89□□□□□ -0.67
P04212 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
P04212 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.89□□□□□ -0.67
P04212 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P04212 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.89□□□□□ -0.67
P04212 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.89□□□□□ -0.67
P04212 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04212 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
P04212 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
P04212 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
P04212 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.88□□□□□ -0.67
P04212 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
P04212 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.88□□□□□ -0.67
P04212 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.88□□□□□ -0.67
P04212 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
P04212 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
P04212 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
P04212 Gm27321-201ENSMUST00000185021 205 ntBASIC10.88□□□□□ -0.67
P04212 Gm17837-201ENSMUST00000186435 985 ntBASIC10.88□□□□□ -0.67
P04212 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.88□□□□□ -0.67
P04212 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04212 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms