Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CfdP03953 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CfdP03953 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.17□□□□□ -0.62
CfdP03953 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.17□□□□□ -0.62
CfdP03953 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.17□□□□□ -0.62
CfdP03953 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CfdP03953 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.17□□□□□ -0.62
CfdP03953 Gm6916-202ENSMUST00000205523 195 ntBASIC11.17□□□□□ -0.62
CfdP03953 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.17□□□□□ -0.62
CfdP03953 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
CfdP03953 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CfdP03953 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
CfdP03953 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
CfdP03953 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
CfdP03953 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
CfdP03953 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CfdP03953 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CfdP03953 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
CfdP03953 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.16□□□□□ -0.62
CfdP03953 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CfdP03953 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
CfdP03953 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CfdP03953 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.16□□□□□ -0.62
CfdP03953 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CfdP03953 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
CfdP03953 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
CfdP03953 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CfdP03953 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.16□□□□□ -0.62
CfdP03953 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
CfdP03953 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.16□□□□□ -0.62
CfdP03953 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Gm11025-201ENSMUST00000140773 466 ntBASIC11.16□□□□□ -0.62
CfdP03953 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Gm8927-201ENSMUST00000181978 981 ntBASIC11.16□□□□□ -0.62
CfdP03953 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.16□□□□□ -0.62
CfdP03953 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.16□□□□□ -0.62
CfdP03953 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.16□□□□□ -0.62
CfdP03953 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.16□□□□□ -0.62
CfdP03953 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Gm3222-201ENSMUST00000071282 990 ntBASIC11.16□□□□□ -0.62
CfdP03953 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.16□□□□□ -0.62
CfdP03953 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.16□□□□□ -0.62
CfdP03953 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.16□□□□□ -0.62
CfdP03953 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.16□□□□□ -0.62
CfdP03953 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CfdP03953 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.15□□□□□ -0.62
CfdP03953 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CfdP03953 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms