Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
TcraP01849 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC9.77□□□□□ -0.85
TcraP01849 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC9.77□□□□□ -0.85
TcraP01849 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.77□□□□□ -0.85
TcraP01849 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
TcraP01849 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.76□□□□□ -0.85
TcraP01849 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
TcraP01849 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
TcraP01849 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
TcraP01849 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC9.76□□□□□ -0.85
TcraP01849 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
TcraP01849 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC9.76□□□□□ -0.85
TcraP01849 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC9.76□□□□□ -0.85
TcraP01849 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC9.76□□□□□ -0.85
TcraP01849 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC9.76□□□□□ -0.85
TcraP01849 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
TcraP01849 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Gm8775-201ENSMUST00000170943 1327 ntBASIC9.76□□□□□ -0.85
TcraP01849 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
TcraP01849 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
TcraP01849 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
TcraP01849 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC9.76□□□□□ -0.85
TcraP01849 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TcraP01849 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
TcraP01849 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
TcraP01849 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC9.75□□□□□ -0.85
TcraP01849 Gm5479-201ENSMUST00000160578 435 ntBASIC9.75□□□□□ -0.85
TcraP01849 Gm16026-204ENSMUST00000162652 683 ntBASIC9.75□□□□□ -0.85
TcraP01849 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
TcraP01849 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC9.75□□□□□ -0.85
TcraP01849 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC9.75□□□□□ -0.85
TcraP01849 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC9.75□□□□□ -0.85
TcraP01849 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
TcraP01849 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
TcraP01849 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TcraP01849 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms