Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CopeO89079 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CopeO89079 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CopeO89079 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
CopeO89079 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CopeO89079 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.81□□□□□ -0.2
CopeO89079 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CopeO89079 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CopeO89079 Gm4995-201ENSMUST00000117247 432 ntBASIC13.81□□□□□ -0.2
CopeO89079 Gm6415-201ENSMUST00000118488 348 ntBASIC13.81□□□□□ -0.2
CopeO89079 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.81□□□□□ -0.2
CopeO89079 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.81□□□□□ -0.2
CopeO89079 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.81□□□□□ -0.2
CopeO89079 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.81□□□□□ -0.2
CopeO89079 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CopeO89079 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Gm46209-201ENSMUST00000217912 553 ntBASIC13.81□□□□□ -0.2
CopeO89079 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.81□□□□□ -0.2
CopeO89079 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
CopeO89079 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.81□□□□□ -0.2
CopeO89079 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CopeO89079 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CopeO89079 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CopeO89079 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
CopeO89079 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CopeO89079 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.8□□□□□ -0.2
CopeO89079 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.8□□□□□ -0.2
CopeO89079 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.8□□□□□ -0.2
CopeO89079 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.8□□□□□ -0.2
CopeO89079 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.8□□□□□ -0.2
CopeO89079 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.8□□□□□ -0.2
CopeO89079 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
CopeO89079 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.8□□□□□ -0.2
CopeO89079 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CopeO89079 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CopeO89079 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CopeO89079 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CopeO89079 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CopeO89079 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopeO89079 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CopeO89079 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.79□□□□□ -0.2
CopeO89079 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopeO89079 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CopeO89079 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopeO89079 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopeO89079 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.79□□□□□ -0.2
CopeO89079 Gm12585-201ENSMUST00000117307 290 ntBASIC13.79□□□□□ -0.2
CopeO89079 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.79□□□□□ -0.2
CopeO89079 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CopeO89079 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopeO89079 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.79□□□□□ -0.2
CopeO89079 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CopeO89079 Gm27525-201ENSMUST00000184465 107 ntBASIC13.79□□□□□ -0.2
CopeO89079 Gm7774-201ENSMUST00000200064 533 ntBASIC13.79□□□□□ -0.2
CopeO89079 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.79□□□□□ -0.2
CopeO89079 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopeO89079 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CopeO89079 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopeO89079 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopeO89079 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.79□□□□□ -0.2
CopeO89079 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CopeO89079 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopeO89079 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CopeO89079 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms