Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hcn1O88704 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.85□□□□□ -0.35
Hcn1O88704 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.84□□□□□ -0.35
Hcn1O88704 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hcn1O88704 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hcn1O88704 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Hcn1O88704 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Hcn1O88704 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.84□□□□□ -0.35
Hcn1O88704 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.84□□□□□ -0.35
Hcn1O88704 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hcn1O88704 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.84□□□□□ -0.35
Hcn1O88704 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.84□□□□□ -0.35
Hcn1O88704 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hcn1O88704 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hcn1O88704 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hcn1O88704 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.84□□□□□ -0.35
Hcn1O88704 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Hcn1O88704 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.84□□□□□ -0.35
Hcn1O88704 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Hcn1O88704 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hcn1O88704 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hcn1O88704 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hcn1O88704 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Hcn1O88704 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hcn1O88704 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Hcn1O88704 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hcn1O88704 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hcn1O88704 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.83□□□□□ -0.36
Hcn1O88704 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.83□□□□□ -0.36
Hcn1O88704 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Hcn1O88704 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.83□□□□□ -0.36
Hcn1O88704 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Hcn1O88704 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.83□□□□□ -0.36
Hcn1O88704 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hcn1O88704 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Hcn1O88704 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.83□□□□□ -0.36
Hcn1O88704 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.83□□□□□ -0.36
Hcn1O88704 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hcn1O88704 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Hcn1O88704 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hcn1O88704 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hcn1O88704 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hcn1O88704 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hcn1O88704 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Hcn1O88704 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hcn1O88704 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.82□□□□□ -0.36
Hcn1O88704 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hcn1O88704 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Hcn1O88704 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hcn1O88704 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hcn1O88704 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.82□□□□□ -0.36
Hcn1O88704 Gm12859-201ENSMUST00000117834 427 ntBASIC12.82□□□□□ -0.36
Hcn1O88704 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Hcn1O88704 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.82□□□□□ -0.36
Hcn1O88704 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hcn1O88704 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hcn1O88704 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hcn1O88704 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.82□□□□□ -0.36
Hcn1O88704 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.82□□□□□ -0.36
Hcn1O88704 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.82□□□□□ -0.36
Hcn1O88704 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.82□□□□□ -0.36
Hcn1O88704 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.82□□□□□ -0.36
Hcn1O88704 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms