Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim1O70400 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim1O70400 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim1O70400 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pdlim1O70400 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim1O70400 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.23□□□□□ -0.29
Pdlim1O70400 Mir1894-201ENSMUST00000122802 81 ntBASIC13.23□□□□□ -0.29
Pdlim1O70400 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Pdlim1O70400 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.23□□□□□ -0.29
Pdlim1O70400 Gm45841-201ENSMUST00000207700 164 ntBASIC13.23□□□□□ -0.29
Pdlim1O70400 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim1O70400 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.23□□□□□ -0.29
Pdlim1O70400 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.23□□□□□ -0.29
Pdlim1O70400 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim1O70400 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim1O70400 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pdlim1O70400 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim1O70400 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim1O70400 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.23□□□□□ -0.29
Pdlim1O70400 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim1O70400 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Pdlim1O70400 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim1O70400 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim1O70400 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim1O70400 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pdlim1O70400 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pdlim1O70400 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pdlim1O70400 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pdlim1O70400 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pdlim1O70400 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.22□□□□□ -0.29
Pdlim1O70400 Gm13612-201ENSMUST00000119276 390 ntBASIC13.22□□□□□ -0.29
Pdlim1O70400 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Pdlim1O70400 Mir7221-201ENSMUST00000184009 72 ntBASIC13.22□□□□□ -0.29
Pdlim1O70400 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Gm7653-201ENSMUST00000214567 508 ntBASIC13.22□□□□□ -0.29
Pdlim1O70400 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pdlim1O70400 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.22□□□□□ -0.29
Pdlim1O70400 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Pdlim1O70400 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pdlim1O70400 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.22□□□□□ -0.29
Pdlim1O70400 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim1O70400 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.22□□□□□ -0.29
Pdlim1O70400 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.22□□□□□ -0.29
Pdlim1O70400 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.22□□□□□ -0.29
Pdlim1O70400 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Gm11478-201ENSMUST00000117851 599 ntBASIC13.21□□□□□ -0.29
Pdlim1O70400 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.21□□□□□ -0.29
Pdlim1O70400 Gm27892-201ENSMUST00000185017 106 ntBASIC13.21□□□□□ -0.29
Pdlim1O70400 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.21□□□□□ -0.29
Pdlim1O70400 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.21□□□□□ -0.29
Pdlim1O70400 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pdlim1O70400 Gm5356-201ENSMUST00000093326 615 ntBASIC13.21□□□□□ -0.29
Pdlim1O70400 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Pdlim1O70400 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim1O70400 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms