Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.54□□□□□ -0.72
Pde6dO55057 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pde6dO55057 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Pde6dO55057 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.54□□□□□ -0.72
Pde6dO55057 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Pde6dO55057 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.54□□□□□ -0.72
Pde6dO55057 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pde6dO55057 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pde6dO55057 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.54□□□□□ -0.72
Pde6dO55057 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Pde6dO55057 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pde6dO55057 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pde6dO55057 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.54□□□□□ -0.72
Pde6dO55057 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Pde6dO55057 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pde6dO55057 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pde6dO55057 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Pde6dO55057 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.53□□□□□ -0.72
Pde6dO55057 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
Pde6dO55057 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Pde6dO55057 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Pde6dO55057 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Pde6dO55057 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC10.53□□□□□ -0.72
Pde6dO55057 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC10.53□□□□□ -0.72
Pde6dO55057 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.53□□□□□ -0.72
Pde6dO55057 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.53□□□□□ -0.72
Pde6dO55057 Gm27301-201ENSMUST00000184012 127 ntBASIC10.53□□□□□ -0.72
Pde6dO55057 Gm27300-201ENSMUST00000184085 97 ntBASIC10.53□□□□□ -0.72
Pde6dO55057 Gm27335-201ENSMUST00000184758 97 ntBASIC10.53□□□□□ -0.72
Pde6dO55057 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 AV026068-213ENSMUST00000223675 1171 ntBASIC10.53□□□□□ -0.72
Pde6dO55057 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.53□□□□□ -0.72
Pde6dO55057 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Pde6dO55057 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Pde6dO55057 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Pde6dO55057 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pde6dO55057 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pde6dO55057 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Pde6dO55057 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Pde6dO55057 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pde6dO55057 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Pde6dO55057 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.52□□□□□ -0.72
Pde6dO55057 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pde6dO55057 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Pde6dO55057 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pde6dO55057 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pde6dO55057 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pde6dO55057 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pde6dO55057 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pde6dO55057 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pde6dO55057 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pde6dO55057 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pde6dO55057 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pde6dO55057 AC159196.2-201ENSMUST00000224082 1622 ntBASIC10.52□□□□□ -0.73
Pde6dO55057 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pde6dO55057 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pde6dO55057 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pde6dO55057 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.52□□□□□ -0.73
Pde6dO55057 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pde6dO55057 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms