Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm2O35900 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm2O35900 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm2O35900 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Lsm2O35900 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Lsm2O35900 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.9□□□□□ -0.5
Lsm2O35900 Gm15460-201ENSMUST00000118147 391 ntBASIC11.9□□□□□ -0.5
Lsm2O35900 Gm11745-201ENSMUST00000121669 448 ntBASIC11.9□□□□□ -0.5
Lsm2O35900 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm2O35900 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.9□□□□□ -0.5
Lsm2O35900 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lsm2O35900 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm2O35900 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.9□□□□□ -0.5
Lsm2O35900 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.9□□□□□ -0.5
Lsm2O35900 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.9□□□□□ -0.5
Lsm2O35900 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Lsm2O35900 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm2O35900 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm2O35900 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lsm2O35900 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm2O35900 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lsm2O35900 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm2O35900 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.9□□□□□ -0.5
Lsm2O35900 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm2O35900 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm2O35900 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.9□□□□□ -0.5
Lsm2O35900 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm2O35900 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lsm2O35900 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lsm2O35900 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.9□□□□□ -0.51
Lsm2O35900 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Lsm2O35900 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Lsm2O35900 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Lsm2O35900 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm2O35900 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.89□□□□□ -0.51
Lsm2O35900 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.89□□□□□ -0.51
Lsm2O35900 Gm6912-201ENSMUST00000117218 544 ntBASIC11.89□□□□□ -0.51
Lsm2O35900 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.89□□□□□ -0.51
Lsm2O35900 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Mir3113-201ENSMUST00000175478 76 ntBASIC11.89□□□□□ -0.51
Lsm2O35900 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Lsm2O35900 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.89□□□□□ -0.51
Lsm2O35900 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm2O35900 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.89□□□□□ -0.51
Lsm2O35900 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.89□□□□□ -0.51
Lsm2O35900 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Lsm2O35900 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Lsm2O35900 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.89□□□□□ -0.51
Lsm2O35900 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.89□□□□□ -0.51
Lsm2O35900 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm2O35900 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lsm2O35900 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Lsm2O35900 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm2O35900 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.88□□□□□ -0.51
Lsm2O35900 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.88□□□□□ -0.51
Lsm2O35900 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.88□□□□□ -0.51
Lsm2O35900 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm2O35900 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm2O35900 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm2O35900 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.88□□□□□ -0.51
Lsm2O35900 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm2O35900 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.88□□□□□ -0.51
Lsm2O35900 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm2O35900 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.88□□□□□ -0.51
Lsm2O35900 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm2O35900 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.88□□□□□ -0.51
Lsm2O35900 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm2O35900 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm2O35900 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm2O35900 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms