Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.15□□□□□ -0.46
Matn3O35701 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Matn3O35701 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.15□□□□□ -0.46
Matn3O35701 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.15□□□□□ -0.46
Matn3O35701 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.15□□□□□ -0.46
Matn3O35701 Gm17271-201ENSMUST00000165535 355 ntBASIC12.15□□□□□ -0.46
Matn3O35701 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.15□□□□□ -0.46
Matn3O35701 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.15□□□□□ -0.46
Matn3O35701 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.15□□□□□ -0.46
Matn3O35701 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.15□□□□□ -0.46
Matn3O35701 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Matn3O35701 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Matn3O35701 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Matn3O35701 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Matn3O35701 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Matn3O35701 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Matn3O35701 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Matn3O35701 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Matn3O35701 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Matn3O35701 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.14□□□□□ -0.47
Matn3O35701 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.14□□□□□ -0.47
Matn3O35701 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.14□□□□□ -0.47
Matn3O35701 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Gm11025-201ENSMUST00000140773 466 ntBASIC12.14□□□□□ -0.47
Matn3O35701 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Matn3O35701 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.14□□□□□ -0.47
Matn3O35701 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.14□□□□□ -0.47
Matn3O35701 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.14□□□□□ -0.47
Matn3O35701 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.14□□□□□ -0.47
Matn3O35701 Chchd1-203ENSMUST00000224633 557 ntBASIC12.14□□□□□ -0.47
Matn3O35701 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.14□□□□□ -0.47
Matn3O35701 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Matn3O35701 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Matn3O35701 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Matn3O35701 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Matn3O35701 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Matn3O35701 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Matn3O35701 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Matn3O35701 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Matn3O35701 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Matn3O35701 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.13□□□□□ -0.47
Matn3O35701 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.13□□□□□ -0.47
Matn3O35701 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Gm15920-201ENSMUST00000118998 402 ntBASIC12.13□□□□□ -0.47
Matn3O35701 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Gm5177-201ENSMUST00000183092 997 ntBASIC12.13□□□□□ -0.47
Matn3O35701 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.13□□□□□ -0.47
Matn3O35701 Gm18027-201ENSMUST00000218947 619 ntBASIC12.13□□□□□ -0.47
Matn3O35701 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Matn3O35701 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Matn3O35701 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.13□□□□□ -0.47
Matn3O35701 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Matn3O35701 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.13□□□□□ -0.47
Matn3O35701 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Matn3O35701 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms