Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Polr1aO35134 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC20.19■□□□□ 0.82
Polr1aO35134 AC125209.1-201ENSMUST00000225812 766 ntBASIC20.19■□□□□ 0.82
Polr1aO35134 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr1aO35134 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr1aO35134 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr1aO35134 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Polr1aO35134 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Polr1aO35134 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC20.18■□□□□ 0.82
Polr1aO35134 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Gm2673-201ENSMUST00000120958 1608 ntBASIC20.18■□□□□ 0.82
Polr1aO35134 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Polr1aO35134 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Polr1aO35134 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Polr1aO35134 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC20.18■□□□□ 0.82
Polr1aO35134 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC20.18■□□□□ 0.82
Polr1aO35134 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Polr1aO35134 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Polr1aO35134 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC20.18■□□□□ 0.82
Polr1aO35134 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr1aO35134 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC20.18■□□□□ 0.82
Polr1aO35134 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC20.17■□□□□ 0.82
Polr1aO35134 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Polr1aO35134 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Polr1aO35134 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Polr1aO35134 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
Polr1aO35134 Gm14263-201ENSMUST00000117955 746 ntBASIC20.17■□□□□ 0.82
Polr1aO35134 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
Polr1aO35134 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr1aO35134 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC20.17■□□□□ 0.82
Polr1aO35134 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Polr1aO35134 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Polr1aO35134 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr1aO35134 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC20.17■□□□□ 0.82
Polr1aO35134 Gm12626-201ENSMUST00000117339 1983 ntBASIC20.17■□□□□ 0.82
Polr1aO35134 Gm12623-201ENSMUST00000119849 1983 ntBASIC20.17■□□□□ 0.82
Polr1aO35134 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Polr1aO35134 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr1aO35134 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Polr1aO35134 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Polr1aO35134 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr1aO35134 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr1aO35134 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Polr1aO35134 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Polr1aO35134 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC20.16■□□□□ 0.82
Polr1aO35134 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr1aO35134 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Polr1aO35134 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Polr1aO35134 Gm13296-201ENSMUST00000117854 997 ntBASIC20.16■□□□□ 0.82
Polr1aO35134 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC20.16■□□□□ 0.82
Polr1aO35134 Gm34767-201ENSMUST00000191813 1062 ntBASIC20.16■□□□□ 0.82
Polr1aO35134 Gm19187-201ENSMUST00000206781 892 ntBASIC20.16■□□□□ 0.82
Polr1aO35134 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC20.16■□□□□ 0.82
Polr1aO35134 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr1aO35134 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr1aO35134 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr1aO35134 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Polr1aO35134 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Polr1aO35134 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr1aO35134 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC20.16■□□□□ 0.82
Polr1aO35134 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr1aO35134 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Polr1aO35134 Gm6963-201ENSMUST00000147879 379 ntBASIC20.16■□□□□ 0.82
Polr1aO35134 Gm22334-201ENSMUST00000158070 133 ntBASIC20.16■□□□□ 0.82
Polr1aO35134 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr1aO35134 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC20.16■□□□□ 0.82
Polr1aO35134 Gm18734-201ENSMUST00000172937 808 ntBASIC20.16■□□□□ 0.82
Polr1aO35134 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Polr1aO35134 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Polr1aO35134 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC20.16■□□□□ 0.82
Polr1aO35134 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr1aO35134 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Polr1aO35134 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr1aO35134 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Polr1aO35134 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr1aO35134 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Polr1aO35134 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr1aO35134 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr1aO35134 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Polr1aO35134 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr1aO35134 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC20.15■□□□□ 0.82
Polr1aO35134 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr1aO35134 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr1aO35134 Gm13996-201ENSMUST00000118456 430 ntBASIC20.15■□□□□ 0.82
Polr1aO35134 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC20.15■□□□□ 0.82
Polr1aO35134 Gm43378-201ENSMUST00000199336 582 ntBASIC20.15■□□□□ 0.82
Polr1aO35134 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms