Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Usp35M0QWN7 AY702102-202ENSMUST00000194651 1173 ntBASIC14.4□□□□□ -0.1
Usp35M0QWN7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp35M0QWN7 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.4□□□□□ -0.1
Usp35M0QWN7 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.4□□□□□ -0.1
Usp35M0QWN7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp35M0QWN7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.4□□□□□ -0.1
Usp35M0QWN7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Usp35M0QWN7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp35M0QWN7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.39□□□□□ -0.11
Usp35M0QWN7 Gm15376-201ENSMUST00000122258 783 ntBASIC14.39□□□□□ -0.11
Usp35M0QWN7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Gm26464-201ENSMUST00000157094 305 ntBASIC14.39□□□□□ -0.11
Usp35M0QWN7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp35M0QWN7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.39□□□□□ -0.11
Usp35M0QWN7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Gm8463-201ENSMUST00000208573 613 ntBASIC14.39□□□□□ -0.11
Usp35M0QWN7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Usp35M0QWN7 AC123738.2-201ENSMUST00000223791 1899 ntBASIC14.39□□□□□ -0.11
Usp35M0QWN7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.39□□□□□ -0.11
Usp35M0QWN7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp35M0QWN7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.38□□□□□ -0.11
Usp35M0QWN7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.38□□□□□ -0.11
Usp35M0QWN7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.38□□□□□ -0.11
Usp35M0QWN7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.38□□□□□ -0.11
Usp35M0QWN7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp35M0QWN7 Gm18041-201ENSMUST00000218210 618 ntBASIC14.38□□□□□ -0.11
Usp35M0QWN7 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.38□□□□□ -0.11
Usp35M0QWN7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms