Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Pcf11G3X9Z4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Pcf11G3X9Z4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcf11G3X9Z4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcf11G3X9Z4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcf11G3X9Z4 Gm6652-201ENSMUST00000186414 1070 ntBASIC19.91■□□□□ 0.78
Pcf11G3X9Z4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC19.91■□□□□ 0.78
Pcf11G3X9Z4 Gm5869-201ENSMUST00000200248 1257 ntBASIC19.91■□□□□ 0.78
Pcf11G3X9Z4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Pcf11G3X9Z4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC19.91■□□□□ 0.78
Pcf11G3X9Z4 Mir433-201ENSMUST00000093564 124 ntBASIC19.91■□□□□ 0.78
Pcf11G3X9Z4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcf11G3X9Z4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Pcf11G3X9Z4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Gm25732-201ENSMUST00000175168 60 ntBASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Gm2260-201ENSMUST00000184965 657 ntBASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 AC167013.1-201ENSMUST00000228592 202 ntBASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcf11G3X9Z4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcf11G3X9Z4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC19.89■□□□□ 0.78
Pcf11G3X9Z4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcf11G3X9Z4 Il17rd-203ENSMUST00000225146 3366 ntBASIC19.89■□□□□ 0.78
Pcf11G3X9Z4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcf11G3X9Z4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Gm14109-201ENSMUST00000118814 309 ntBASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Gm5904-201ENSMUST00000210286 865 ntBASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcf11G3X9Z4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Gm14371-201ENSMUST00000138925 1518 ntBASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Gm13570-201ENSMUST00000140763 309 ntBASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Ighv5-7-201ENSMUST00000192302 244 ntBASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Gm6992-201ENSMUST00000217973 1607 ntBASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Gm10710-201ENSMUST00000047876 3971 ntBASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Pcf11G3X9Z4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Gm5363-201ENSMUST00000211927 938 ntBASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 AC125209.1-201ENSMUST00000225812 766 ntBASIC19.87■□□□□ 0.77
Pcf11G3X9Z4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms