Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc188F6WEU2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Gm6963-201ENSMUST00000147879 379 ntBASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Gm9463-201ENSMUST00000206707 601 ntBASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Gm6867-201ENSMUST00000219165 425 ntBASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc188F6WEU2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Gm13600-201ENSMUST00000117949 744 ntBASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Gm12058-201ENSMUST00000118614 437 ntBASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Gm5621-201ENSMUST00000187303 640 ntBASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Gm1821-202ENSMUST00000227415 750 ntBASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc188F6WEU2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm23949-201ENSMUST00000104027 127 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm13035-201ENSMUST00000117496 342 ntBASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc188F6WEU2 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms