Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ube4aE9Q735 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.98■□□□□ 0.15
Ube4aE9Q735 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.98■□□□□ 0.15
Ube4aE9Q735 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Gm4986-201ENSMUST00000119731 549 ntBASIC15.98■□□□□ 0.15
Ube4aE9Q735 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Gm37489-201ENSMUST00000191883 159 ntBASIC15.98■□□□□ 0.15
Ube4aE9Q735 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
Ube4aE9Q735 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ube4aE9Q735 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Gm2991-201ENSMUST00000173338 480 ntBASIC15.97■□□□□ 0.15
Ube4aE9Q735 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Gm4857-201ENSMUST00000192718 785 ntBASIC15.97■□□□□ 0.15
Ube4aE9Q735 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.97■□□□□ 0.15
Ube4aE9Q735 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ube4aE9Q735 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Gm24255-201ENSMUST00000104481 128 ntBASIC15.96■□□□□ 0.15
Ube4aE9Q735 Snord83b-201ENSMUST00000104546 94 ntBASIC15.96■□□□□ 0.15
Ube4aE9Q735 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ube4aE9Q735 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.96■□□□□ 0.15
Ube4aE9Q735 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.96■□□□□ 0.15
Ube4aE9Q735 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.96■□□□□ 0.15
Ube4aE9Q735 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.96■□□□□ 0.15
Ube4aE9Q735 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms