Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb9E9Q5G2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Gm13369-201ENSMUST00000119442 987 ntBASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Gm13123-201ENSMUST00000122173 492 ntBASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Mir7221-201ENSMUST00000184009 72 ntBASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb9E9Q5G2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.71■□□□□ 0.1
Pcdhb9E9Q5G2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb9E9Q5G2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb9E9Q5G2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Gm11978-201ENSMUST00000122315 466 ntBASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Mir1982-201ENSMUST00000157368 74 ntBASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Gm37922-201ENSMUST00000195596 455 ntBASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb9E9Q5G2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Gm13226-201ENSMUST00000117838 404 ntBASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Gm4271-201ENSMUST00000174444 973 ntBASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Gm18062-201ENSMUST00000208020 547 ntBASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Gm18055-201ENSMUST00000208254 547 ntBASIC15.69■□□□□ 0.1
Pcdhb9E9Q5G2 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms