Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13□□□□□ -0.33
Col6a3E9PWQ3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13□□□□□ -0.33
Col6a3E9PWQ3 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Gm7395-201ENSMUST00000216059 1045 ntBASIC13□□□□□ -0.33
Col6a3E9PWQ3 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a3E9PWQ3 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Gm42682-201ENSMUST00000198349 1265 ntBASIC13□□□□□ -0.33
Col6a3E9PWQ3 AC138716.2-201ENSMUST00000226670 1016 ntBASIC13□□□□□ -0.33
Col6a3E9PWQ3 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a3E9PWQ3 Gm22058-201ENSMUST00000083393 310 ntBASIC13□□□□□ -0.33
Col6a3E9PWQ3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Gm45594-201ENSMUST00000211717 241 ntBASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Gm16166-201ENSMUST00000118291 787 ntBASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Gm15744-201ENSMUST00000161734 213 ntBASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Gm29808-201ENSMUST00000194419 468 ntBASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col6a3E9PWQ3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Gm27675-201ENSMUST00000184527 94 ntBASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Gm27910-201ENSMUST00000185004 107 ntBASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 AC137950.2-202ENSMUST00000227150 1635 ntBASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Gm19009-201ENSMUST00000223072 823 ntBASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Gm12419-201ENSMUST00000116649 636 ntBASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Gm6447-201ENSMUST00000118905 835 ntBASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a3E9PWQ3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Mir326-201ENSMUST00000083637 95 ntBASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms