Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Gm11524-201ENSMUST00000119349 807 ntBASIC12.13□□□□□ -0.47
Gm3543D3Z235 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Gm9002-201ENSMUST00000178437 499 ntBASIC12.13□□□□□ -0.47
Gm3543D3Z235 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Gm43094-201ENSMUST00000196549 921 ntBASIC12.13□□□□□ -0.47
Gm3543D3Z235 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Mir497b-201ENSMUST00000093601 125 ntBASIC12.13□□□□□ -0.47
Gm3543D3Z235 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Grk6-205ENSMUST00000224653 2976 ntBASIC12.13□□□□□ -0.47
Gm3543D3Z235 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3543D3Z235 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.12□□□□□ -0.47
Gm3543D3Z235 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.12□□□□□ -0.47
Gm3543D3Z235 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.12□□□□□ -0.47
Gm3543D3Z235 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Gm15806-201ENSMUST00000120696 955 ntBASIC12.12□□□□□ -0.47
Gm3543D3Z235 Gm12138-201ENSMUST00000122180 951 ntBASIC12.12□□□□□ -0.47
Gm3543D3Z235 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.12□□□□□ -0.47
Gm3543D3Z235 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.12□□□□□ -0.47
Gm3543D3Z235 Gm28911-201ENSMUST00000188837 117 ntBASIC12.12□□□□□ -0.47
Gm3543D3Z235 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Gm18187-201ENSMUST00000196476 984 ntBASIC12.12□□□□□ -0.47
Gm3543D3Z235 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Gm19078-201ENSMUST00000206311 727 ntBASIC12.12□□□□□ -0.47
Gm3543D3Z235 Gm44719-201ENSMUST00000206404 149 ntBASIC12.12□□□□□ -0.47
Gm3543D3Z235 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gm3543D3Z235 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.12□□□□□ -0.47
Gm3543D3Z235 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.11□□□□□ -0.47
Gm3543D3Z235 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.11□□□□□ -0.47
Gm3543D3Z235 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.11□□□□□ -0.47
Gm3543D3Z235 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm3543D3Z235 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms