Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Mir5120-201ENSMUST00000175020 78 ntBASIC11.98□□□□□ -0.49
Shank1D3YZU1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.98□□□□□ -0.49
Shank1D3YZU1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.98□□□□□ -0.49
Shank1D3YZU1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shank1D3YZU1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
Shank1D3YZU1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Mir698-201ENSMUST00000102164 109 ntBASIC11.97□□□□□ -0.49
Shank1D3YZU1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Shank1D3YZU1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Gm7809-201ENSMUST00000153199 742 ntBASIC11.96□□□□□ -0.49
Shank1D3YZU1 Gm24990-201ENSMUST00000157406 323 ntBASIC11.96□□□□□ -0.49
Shank1D3YZU1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.96□□□□□ -0.49
Shank1D3YZU1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.96□□□□□ -0.49
Shank1D3YZU1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.96□□□□□ -0.49
Shank1D3YZU1 Gm37489-201ENSMUST00000191883 159 ntBASIC11.96□□□□□ -0.49
Shank1D3YZU1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Gm43947-201ENSMUST00000203019 959 ntBASIC11.96□□□□□ -0.49
Shank1D3YZU1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.96□□□□□ -0.49
Shank1D3YZU1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Shank1D3YZU1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms