Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm12887B1AVM1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Gm2810-201ENSMUST00000118681 990 ntBASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC10.8□□□□□ -0.68
Gm12887B1AVM1 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.8□□□□□ -0.68
Gm12887B1AVM1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gm12887B1AVM1 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Gm12350-201ENSMUST00000121208 462 ntBASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Gm27631-201ENSMUST00000184163 466 ntBASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.79□□□□□ -0.68
Gm12887B1AVM1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms