Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1aA2APX8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1aA2APX8 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.95□□□□□ -0.18
Scn1aA2APX8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1aA2APX8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1aA2APX8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1aA2APX8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1aA2APX8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scn1aA2APX8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn1aA2APX8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1aA2APX8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.95□□□□□ -0.18
Scn1aA2APX8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1aA2APX8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.95□□□□□ -0.18
Scn1aA2APX8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1aA2APX8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1aA2APX8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.94□□□□□ -0.18
Scn1aA2APX8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Gm12742-201ENSMUST00000117326 410 ntBASIC13.94□□□□□ -0.18
Scn1aA2APX8 Gm8805-201ENSMUST00000117848 313 ntBASIC13.94□□□□□ -0.18
Scn1aA2APX8 Gm12363-201ENSMUST00000122250 668 ntBASIC13.94□□□□□ -0.18
Scn1aA2APX8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.94□□□□□ -0.18
Scn1aA2APX8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.94□□□□□ -0.18
Scn1aA2APX8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1aA2APX8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn1aA2APX8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Gm12384-201ENSMUST00000119228 919 ntBASIC13.93□□□□□ -0.18
Scn1aA2APX8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.93□□□□□ -0.18
Scn1aA2APX8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Gm26185-201ENSMUST00000157692 266 ntBASIC13.93□□□□□ -0.18
Scn1aA2APX8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.93□□□□□ -0.18
Scn1aA2APX8 Gm43818-201ENSMUST00000200605 466 ntBASIC13.93□□□□□ -0.18
Scn1aA2APX8 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.93□□□□□ -0.18
Scn1aA2APX8 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Gm5187-201ENSMUST00000117317 991 ntBASIC13.93□□□□□ -0.18
Scn1aA2APX8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.93□□□□□ -0.18
Scn1aA2APX8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn1aA2APX8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Scn1aA2APX8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1aA2APX8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Scn1aA2APX8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1aA2APX8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1aA2APX8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1aA2APX8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1aA2APX8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1aA2APX8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1aA2APX8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
Scn1aA2APX8 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.92□□□□□ -0.18
Scn1aA2APX8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1aA2APX8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn1aA2APX8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms