Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm23912-201ENSMUST00000104687 87 ntBASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm13736-201ENSMUST00000119272 253 ntBASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm13281-201ENSMUST00000120871 567 ntBASIC6.85□□□□□ -1.31
Ubr4A2AN08 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm17070-201ENSMUST00000170463 784 ntBASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm42682-201ENSMUST00000198349 1265 ntBASIC6.85□□□□□ -1.31
Ubr4A2AN08 AC129308.3-201ENSMUST00000225652 524 ntBASIC6.85□□□□□ -1.31
Ubr4A2AN08 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm9109-201ENSMUST00000120254 1405 ntBASIC6.85□□□□□ -1.31
Ubr4A2AN08 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC6.85□□□□□ -1.31
Ubr4A2AN08 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm22121-201ENSMUST00000175148 54 ntBASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm43664-201ENSMUST00000196038 734 ntBASIC6.85□□□□□ -1.31
Ubr4A2AN08 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Gm7727-201ENSMUST00000219830 671 ntBASIC6.85□□□□□ -1.31
Ubr4A2AN08 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC6.85□□□□□ -1.31
Ubr4A2AN08 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ubr4A2AN08 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Gm37859-201ENSMUST00000195529 2173 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Gm24891-201ENSMUST00000104391 136 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Gm14644-201ENSMUST00000116671 647 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Gm12856-201ENSMUST00000119471 1293 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Rprl1-201ENSMUST00000158050 327 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Gm8018-201ENSMUST00000173536 789 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Gm19430-201ENSMUST00000193847 2137 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Gm11422-201ENSMUST00000118925 1103 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Kif4-ps-202ENSMUST00000185083 652 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Gm28882-201ENSMUST00000185504 314 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Gm8531-201ENSMUST00000188319 893 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Gm30055-201ENSMUST00000203175 803 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ubr4A2AN08 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC6.84□□□□□ -1.31
Ubr4A2AN08 AC154305.4-201ENSMUST00000224520 614 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Lgi3-203ENSMUST00000226548 1001 ntBASIC6.84□□□□□ -1.31
Ubr4A2AN08 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ubr4A2AN08 Gm6903-201ENSMUST00000160509 1366 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms