Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm27920-201ENSMUST00000183953 96 ntBASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 AC138767.1-201ENSMUST00000222661 415 ntBASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm18733-201ENSMUST00000173950 856 ntBASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms