Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav18A0A075B656 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav18A0A075B656 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav18A0A075B656 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Gm15678-201ENSMUST00000117573 960 ntBASIC10.98□□□□□ -0.65
Trav18A0A075B656 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Gm27321-201ENSMUST00000185021 205 ntBASIC10.98□□□□□ -0.65
Trav18A0A075B656 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.98□□□□□ -0.65
Trav18A0A075B656 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.98□□□□□ -0.65
Trav18A0A075B656 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.98□□□□□ -0.65
Trav18A0A075B656 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.98□□□□□ -0.65
Trav18A0A075B656 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav18A0A075B656 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.97□□□□□ -0.65
Trav18A0A075B656 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Gm15240-201ENSMUST00000118156 720 ntBASIC10.97□□□□□ -0.65
Trav18A0A075B656 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.97□□□□□ -0.65
Trav18A0A075B656 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav18A0A075B656 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.97□□□□□ -0.65
Trav18A0A075B656 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.97□□□□□ -0.65
Trav18A0A075B656 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav18A0A075B656 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.97□□□□□ -0.65
Trav18A0A075B656 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms