Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Gm13616-201ENSMUST00000120600 222 ntBASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Gm10766-202ENSMUST00000194123 606 ntBASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5-4A0A075B652 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Gm13453-201ENSMUST00000118708 357 ntBASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Gm27680-201ENSMUST00000184192 160 ntBASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Gm43703-201ENSMUST00000200523 763 ntBASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5-4A0A075B652 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms