Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Gm43347-201ENSMUST00000200226 580 ntBASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Gm45167-201ENSMUST00000208007 322 ntBASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 AC147366.1-201ENSMUST00000227671 852 ntBASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Gm7104-201ENSMUST00000179741 2532 ntBASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Gm6376-201ENSMUST00000209407 580 ntBASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Spr-ps1-201ENSMUST00000089584 605 ntBASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms