Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.29□□□□□ -0.76
PdfS4R2K0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.29□□□□□ -0.76
PdfS4R2K0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
PdfS4R2K0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.29□□□□□ -0.76
PdfS4R2K0 Gm14701-201ENSMUST00000117156 348 ntBASIC10.29□□□□□ -0.76
PdfS4R2K0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC10.29□□□□□ -0.76
PdfS4R2K0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.29□□□□□ -0.76
PdfS4R2K0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.29□□□□□ -0.76
PdfS4R2K0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.29□□□□□ -0.76
PdfS4R2K0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.29□□□□□ -0.76
PdfS4R2K0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.29□□□□□ -0.76
PdfS4R2K0 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.29□□□□□ -0.76
PdfS4R2K0 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.29□□□□□ -0.76
PdfS4R2K0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
PdfS4R2K0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
PdfS4R2K0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.29□□□□□ -0.76
PdfS4R2K0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
PdfS4R2K0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
PdfS4R2K0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
PdfS4R2K0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
PdfS4R2K0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.28□□□□□ -0.76
PdfS4R2K0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.28□□□□□ -0.76
PdfS4R2K0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.28□□□□□ -0.76
PdfS4R2K0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.28□□□□□ -0.76
PdfS4R2K0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.28□□□□□ -0.76
PdfS4R2K0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.28□□□□□ -0.76
PdfS4R2K0 Gm10275-202ENSMUST00000168697 495 ntBASIC10.28□□□□□ -0.76
PdfS4R2K0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.28□□□□□ -0.76
PdfS4R2K0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.28□□□□□ -0.76
PdfS4R2K0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.28□□□□□ -0.76
PdfS4R2K0 Gm18889-201ENSMUST00000174284 929 ntBASIC10.28□□□□□ -0.76
PdfS4R2K0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.28□□□□□ -0.76
PdfS4R2K0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Mir6990-201ENSMUST00000183724 91 ntBASIC10.28□□□□□ -0.76
PdfS4R2K0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.28□□□□□ -0.76
PdfS4R2K0 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.28□□□□□ -0.76
PdfS4R2K0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
PdfS4R2K0 Gm10275-201ENSMUST00000092620 635 ntBASIC10.28□□□□□ -0.76
PdfS4R2K0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.28□□□□□ -0.76
PdfS4R2K0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.28□□□□□ -0.76
PdfS4R2K0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
PdfS4R2K0 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.28□□□□□ -0.76
PdfS4R2K0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
PdfS4R2K0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Gm5763-201ENSMUST00000155951 1530 ntBASIC10.28□□□□□ -0.76
PdfS4R2K0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PdfS4R2K0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms