Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Gm9002-201ENSMUST00000178437 499 ntBASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Gm18187-201ENSMUST00000196476 984 ntBASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Gm12485-201ENSMUST00000119641 291 ntBASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Gm2445-201ENSMUST00000182798 989 ntBASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clcf1Q9QZM3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms