Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Gm17837-201ENSMUST00000186435 985 ntBASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl28Q9JIL2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Ccl28Q9JIL2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Ccl28Q9JIL2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Ccl28Q9JIL2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Gm6912-201ENSMUST00000117218 544 ntBASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Gm14767-201ENSMUST00000121559 586 ntBASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Gm24420-201ENSMUST00000176676 59 ntBASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Gm3436-201ENSMUST00000179930 840 ntBASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Gm43703-201ENSMUST00000200523 763 ntBASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl28Q9JIL2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl28Q9JIL2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl28Q9JIL2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl28Q9JIL2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl28Q9JIL2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl28Q9JIL2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl28Q9JIL2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl28Q9JIL2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl28Q9JIL2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccl28Q9JIL2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 133.8 ms