Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Gm12485-201ENSMUST00000119641 291 ntBASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Gm27989-201ENSMUST00000184721 107 ntBASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Gm5279-201ENSMUST00000199575 745 ntBASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Gm19078-201ENSMUST00000206311 727 ntBASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup50Q9JIH2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.15□□□□□ -0.14
Nup50Q9JIH2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Gm27838-201ENSMUST00000184829 128 ntBASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup50Q9JIH2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Nup50Q9JIH2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Gm22189-201ENSMUST00000103822 86 ntBASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Gm11524-201ENSMUST00000119349 807 ntBASIC14.14□□□□□ -0.15
Nup50Q9JIH2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Gm24694-201ENSMUST00000180054 110 ntBASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Mir6956-201ENSMUST00000183598 62 ntBASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Mir7684-201ENSMUST00000183858 60 ntBASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Gm27663-201ENSMUST00000184839 110 ntBASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Gm38144-201ENSMUST00000192790 465 ntBASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Gm20445-201ENSMUST00000061905 565 ntBASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup50Q9JIH2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup50Q9JIH2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nup50Q9JIH2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup50Q9JIH2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup50Q9JIH2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup50Q9JIH2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nup50Q9JIH2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nup50Q9JIH2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup50Q9JIH2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms