Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Psmb5-202ENSMUST00000227257 622 ntBASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Hmgn3Q9DCB1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgn3Q9DCB1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Gm37714-201ENSMUST00000194742 342 ntBASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Hmgn3Q9DCB1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms