Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sf3a3Q9D554 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Gm29741-201ENSMUST00000192667 421 ntBASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sf3a3Q9D554 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.53□□□□□ -0.24
Sf3a3Q9D554 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3a3Q9D554 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3a3Q9D554 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3a3Q9D554 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3a3Q9D554 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3a3Q9D554 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3a3Q9D554 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3a3Q9D554 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sf3a3Q9D554 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sf3a3Q9D554 Gm24589-201ENSMUST00000116692 94 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms